KS-Detect - Validation of Solar Thermal PCR for the Diagnosis of Kaposi's Sarcoma Using Pseudo-Biopsy Samples.

TitleKS-Detect - Validation of Solar Thermal PCR for the Diagnosis of Kaposi's Sarcoma Using Pseudo-Biopsy Samples.
Publication TypeJournal Article
Year of Publication2016
AuthorsSnodgrass R, Gardner A, Jiang L, Fu C, Cesarman E, Erickson D
JournalPLoS One
Volume11
Issue1
Paginatione0147636
Date Published2016
ISSN1932-6203
KeywordsBiopsy, Cell Line, Herpesvirus 8, Human, Humans, Microfluidic Analytical Techniques, Polymerase Chain Reaction, Reproducibility of Results, Sarcoma, Kaposi, Sensitivity and Specificity, Skin, Skin Neoplasms, Solar Energy
Abstract

Resource-limited settings present unique engineering challenges for medical diagnostics. Diagnosis is often needed for those unable to reach central healthcare systems, making portability and independence from traditional energy infrastructure essential device parameters. In 2014, our group presented a microfluidic device that performed a solar-powered variant of the polymerase chain reaction, which we called solar thermal PCR. In this work, we expand on our previous effort by presenting an integrated, portable, solar thermal PCR system targeted towards the diagnosis of Kaposi's sarcoma. We call this system KS-Detect, and we now report the system's performance as a diagnostic tool using pseudo-biopsy samples made from varying concentrations of human lymphoma cell lines positive for the KS herpesvirus (KSHV). KS-Detect achieved 83% sensitivity and 70% specificity at high (≥ 10%) KSHV+ cell concentrations when diagnosing pseudo-biopsy samples by smartphone image. Using histology, we confirm that our prepared pseudo-biopsies contain similar KSHV+ cell concentrations as human biopsies positive for KS. Through our testing of samples derived from human cell lines, we validate KS-Detect as a viable, portable KS diagnostic tool, and we identify critical engineering considerations for future solar-thermal PCR devices.

DOI10.1371/journal.pone.0147636
Alternate JournalPLoS One
PubMed ID26799834
PubMed Central IDPMC4723253
Grant ListR21 EB016803 / EB / NIBIB NIH HHS / United States
UH3 CA202723 / CA / NCI NIH HHS / United States
UL1 TR002384 / TR / NCATS NIH HHS / United States
EB016803 / EB / NIBIB NIH HHS / United States
Related Lab: 
Related Faculty: 
Ethel Cesarman, M.D., Ph.D.

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