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Pathology & Laboratory Medicine

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Faculty Publications

Recently Added Publications:

COVID-19 Viral and Serology Testing in New York City Health Care Workers

Sabrina Racine-Brzostek, MD, PhD, He Sarina Yang, PhD, Amy Chadburn, MD, Massimo Loda, MD, Zhen Zhao, PhD, Melissa Cushing, MD

COVID-19 Viral and Serology Testing in New York City Health Care Workers

Am J Clin Pathol. 2020 Oct 13;154(5):592-595. 

Racine-Brzostek SE, Yang HS, Chadburn A, Orlander D, An A, Campion TR, Yee J, Chen Z, Loda M, Zhao Z, Kaushal R, Cushing MM.

PMID: 32914176; PMCID: PMC7499487

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Integrating genetic and non-genetic determinants of cancer evolution by single-cell multi-omics

Seung Ha (Anna) Nam, MD

Integrating genetic and non-genetic determinants of cancer evolution by single-cell multi-omics

Nat Rev Genet. 2020 Aug 17. Review Article.

Nam AS, Chaligne R, Landau DA.

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Recounting the FANTOM CAGE-Associated Transcriptome.

Luigi Marchionni, MD, PhD

Recounting the FANTOM CAGE-Associated Transcriptome.

Genome Res. 2020 Jul;30(7):1073-1081. 

Imada EL, Sanchez DF, Collado-Torres L, Wilks C, Matam T, Dinalankara W, Stupnikov A, Lobo-Pereira F, Yip CW, Yasuzawa K, Kondo N, Itoh M, Suzuki H, Kasukawa T, Hon CC, de Hoon MJL, Shin JW, Carninci P, Jaffe AE, Leek JT, Favorov A, Franco GR, Langmead B, Marchionni L.

PMID: 32079618; PMCID: PMC7397872

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Clinical significance of blue-green neutrophil and monocyte cytoplasmic inclusions in SARS-CoV-2 positive critically ill patients

Sabrina Racine-Brzostek, MD, PhD, Alain Borczuk, MD, Steven P. Salvatore, MD, He Sarina Yang, PhD, Zhen Zhao, PhD, Ljiljana Vasovic, MD

Clinical significance of blue-green neutrophil and monocyte cytoplasmic inclusions in SARS-CoV-2 positive critically ill patients

Br J Haematol. 2020 Jul;190(2):e89-e92. 

Cantu MD, Towne WS, Emmons FN, Mostyka M, Borczuk A, Salvatore SP, Yang HS, Zhao Z, Vasovic LV, Racine-Brzostek SE.

PMID: 32453859; PMCID: PMC7283650

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Single-molecule-based super-resolution images in the presence of multiple fluorophores

Paul Simonson, MD, PhD

Single-molecule-based super-resolution images in the presence of multiple fluorophores

Nano Lett. 2011 Nov 9;11(11):5090-6.

Simonson PD, Rothenberg E, Selvin PR.

PMID: 22003850; PMCID: PMC3212641.

Erratum in: Nano Lett. 2013 Mar 13;13(3):1366. 

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Differential gene methylation and expression of HOX transcription factor family in orbitofacial neurofibroma

Luigi Marchionni, MD, PhD

Differential gene methylation and expression of HOX transcription factor family in orbitofacial neurofibroma

Acta Neuropathol Commun. 2020 May 4;8(1):62. 

Arnold A, Imada EL, Zhang ML, Edward DP, Marchionni L, Rodriguez FJ.

Erratum in: Acta Neuropathol Commun. 2020 May 14;8(1):69.

PMID: 32366326; PMCID: PMC7197183.

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Biallelic PTCH1 Inactivation Is a Dominant Genomic Change in Sporadic Keratocystic Odontogenic Tumors

Hamza Gokozan, MD

Biallelic PTCH1 Inactivation Is a Dominant Genomic Change in Sporadic Keratocystic Odontogenic Tumors

Am J Surg Pathol. 2020 Apr;44(4):553-560. 

Stojanov IJ, Schaefer IM, Menon RS, Wasman J, Gokozan HN, Garcia EP, Baur DA, Woo SB, Sholl LM.

PMID: 31725470; PMCID: PMC7071995

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PTEN Loss with ERG Negative Status is Associated with Lethal Disease after Radical Prostatectomy

Luigi Marchionni, MD, PhD

PTEN Loss with ERG Negative Status is Associated with Lethal Disease after Radical Prostatectomy

J Urol. 2020 Feb;203(2):344-350. 

Haney NM, Faisal FA, Lu J, Guedes LB, Reuter VE, Scher HI, Eastham JA, Marchionni L, Joshu C, Gopalan A, Lotan TL. 

PMID: 31502941

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Combined extracts of Echinacea angustifolia DC. and Zingiber officinale Roscoe in softgel capsules: Pharmacokinetics and immunomodulatory effects assessed by gene expression profiling

Luigi Marchionni, MD, PhD

Combined extracts of Echinacea angustifolia DC. and Zingiber officinale Roscoe in softgel capsules: Pharmacokinetics and immunomodulatory effects assessed by gene expression profiling

Phytomedicine. 2019 Dec;65:153090. 

Dall'Acqua S, Grabnar I, Verardo R, Klaric E, Marchionni L, Luidy-Imada E, Sut S, Agostinis C, Bulla R, Perissutti B, Voinovich D.

PMID: 31557666

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Relationships of p16 Immunohistochemistry and Other Biomarkers With Diagnoses of Cervical Abnormalities: Implications for LAST Terminology

Anna Yemelyanova, MD

Relationships of p16 Immunohistochemistry and Other Biomarkers With Diagnoses of Cervical Abnormalities: Implications for LAST Terminology

Arch Pathol Lab Med. 2020 Jun;144(6):725-734.

Castle PE, Adcock R, Cuzick J, Wentzensen N, Torrez-Martinez NE, Torres SM, Stoler MH, Ronnett BM, Joste NE, Darragh TM, Gravitt PE, Schiffman M, Hunt WC, Kinney WK, Wheeler CM; New Mexico HPV Pap Registry Steering Committee; p16 IHC Study Panel.

PMID: 31718233.

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Suppression of monosodium urate crystal-induced inflammation by inhibiting TGF-β-activated kinase 1-dependent signaling: role of the ubiquitin proteasome system

Madhu Ouseph, MD, PhD

Suppression of monosodium urate crystal-induced inflammation by inhibiting TGF-β-activated kinase 1-dependent signaling: role of the ubiquitin proteasome system

Cell Mol Immunol. 2019 Sep 11. Epub ahead of print.

Singh AK, Haque M, O'Sullivan K, Chourasia M, Ouseph MM, Ahmed S.

PMID: 31511642

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HDAC7 regulates histone 3 lysine 27 acetylation and transcriptional activity at super-enhancer-associated genes in breast cancer stem cells

Tan Ince, MD, PhD

HDAC7 regulates histone 3 lysine 27 acetylation and transcriptional activity at super-enhancer-associated genes in breast cancer stem cells

Oncogene. 2019 Sep;38(39):6599-6614.

Caslini C, Hong S, Ban YJ, Chen XS, Ince TA.

PMID: 31375747

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Acquired Hemophilia A After Nivolumab Therapy in a Patient With Metastatic Squamous Cell Carcinoma of the Lung Successfully Managed With Rituximab

Hamza Gokozan, MD

Acquired Hemophilia A After Nivolumab Therapy in a Patient With Metastatic Squamous Cell Carcinoma of the Lung Successfully Managed With Rituximab

Clin Lung Cancer. 2019 Sep;20(5):e560-e563. 

Gokozan HN, Friedman JD, Schmaier AH, Downes KA, Farah LA, Reeves HM. 

PMID: 31311716

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Ovarian Cancer Treatment Stratification Using Ex Vivo Drug Sensitivity Testing

Tan Ince, MD, PhD

Ovarian Cancer Treatment Stratification Using Ex Vivo Drug Sensitivity Testing

Anticancer Res. 2019 Aug;39(8):4023-4030.

Lohse I, Azzam DJ, Al-Ali H, Volmar CH, Brothers SP, Ince TA, Wahlestedt C.

PMID: 31366484

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Absolute immature platelet count dynamics of thrombotic thrombocytopenic purpura patients with high ADAMTS13 inhibitor

Hamza Gokozan, MD

Absolute immature platelet count dynamics of thrombotic thrombocytopenic purpura patients with high ADAMTS13 inhibitor

Thromb Res. 2019 Jul;179:128-131. 

Gokozan HN, Reeves HM, Maitta RW.

PMID: 31129448

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Association of Bacterial Vaginosis and Human Papilloma Virus Infection With Cervical Squamous Intraepithelial Lesions

Hamza Gokozan, MD

Association of Bacterial Vaginosis and Human Papilloma Virus Infection With Cervical Squamous Intraepithelial Lesions

Am J Clin Pathol. 2019 Jul 5;152(2):185-189.

Dahoud W, Michael CW, Gokozan H, Nakanishi AK, Harbhajanka A.

PMID: 31065675

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Immune environment in serrated lesions of the colon: intraepithelial lymphocyte density, PD-1, and PD-L1 expression correlate with serrated neoplasia pathway progression

Madhu Ouseph, MD, PhD

Immune environment in serrated lesions of the colon: intraepithelial lymphocyte density, PD-1, and PD-L1 expression correlate with serrated neoplasia pathway progression

Hum Pathol. 2019 Jan;83:115-123.

Acosta-Gonzalez G, Ouseph M, Lombardo K, Lu S, Glickman J, Resnick MB.

PMID: 30172913; PMCID: PMC6365194

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CDK12 inactivation across solid tumors: an actionable genetic subtype

Luigi Marchionni, MD, PhD

CDK12 inactivation across solid tumors: an actionable genetic subtype

Oncoscience. 2019 May 10;6(5-6):312-316. 

Marshall CH, Imada EL, Tang Z, Marchionni L, Antonarakis ES.

PMID: 31360735; PMCID: PMC6650168

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The impact of Daratumumab on transfusion service costs

Sabrina Racine-Brzostek, MD, PhD

The impact of Daratumumab on transfusion service costs

Transfusion. 2019 Apr;59(4):1252-1258.

Cushing MM, DeSimone RA, Goel R, Hsu YS, Parra P, Racine-Brzostek SE, Degtyaryova D, Lo DT, Morrison M, Crowley KM, Rossi A, Vasovic LV.

PMID: 30620407

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Increased Serine and One-Carbon Pathway Metabolism by PKCλ/ι Deficiency Promotes Neuroendocrine Prostate Cancer

Jorge Moscat, PhD

Increased Serine and One-Carbon Pathway Metabolism by PKCλ/ι Deficiency Promotes Neuroendocrine Prostate Cancer

Cancer Cell. 2019 Mar 18;35(3):385-400.

Reina-Campos M, Linares JF, Duran A, Cordes T, L'Hermitte A, Badur MG, Bhangoo MS, Thorson PK, Richards A, Rooslid T, Garcia-Olmo DC, Nam-Cha SY, Salinas-Sanchez AS, Eng K, Beltran H, Scott DA, Metallo CM, Moscat J, Diaz-Meco MT.  

PMID: 30827887; PMCID: PMC6424636

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